MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,342
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 67
misc RNA:
Total features: 4,415
Total number of protein coding genes annotated/found:
4,342
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Items 61 - 80
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000015.1
SEQF5047_00121
Genome Viewer
NA
AA
99/33
185-87
hypothetical protein
SEQF5047|JADGLP010000022.1
SEQF5047_00122
Genome Viewer
NA
AA
1560/520
1588-29
hypothetical protein
SEQF5047|JADGLP010000025.1
SEQF5047_00123
Genome Viewer
NA
AA
1575/525
1711-137
IS1182 family transposase ISBf5
SEQF5047|JADGLP010000029.1
SEQF5047_00125
Genome Viewer
NA
AA
483/161
429-911
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00126
Genome Viewer
NA
AA
2352/784
3235-884
Beta-xylosidase
SEQF5047|JADGLP010000032.1
SEQF5047_00127
Genome Viewer
NA
AA
1215/405
4602-3388
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00128
Genome Viewer
NA
AA
1014/338
5627-4614
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00129
Genome Viewer
NA
AA
1014/338
6665-5652
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00130
Genome Viewer
NA
AA
1602/534
8309-6708
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00131
Genome Viewer
NA
AA
3363/1121
11684-8322
TonB-dependent receptor P3
SEQF5047|JADGLP010000032.1
SEQF5047_00132
Genome Viewer
NA
AA
972/324
12839-11868
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00133
Genome Viewer
NA
AA
543/181
13533-12991
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00134
Genome Viewer
NA
AA
1140/380
14932-13793
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00135
Genome Viewer
NA
AA
1113/371
16077-14965
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00136
Genome Viewer
NA
AA
1641/547
17752-16112
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00137
Genome Viewer
NA
AA
3333/1111
21100-17768
TonB-dependent receptor P3
SEQF5047|JADGLP010000032.1
SEQF5047_00138
Genome Viewer
NA
AA
984/328
22246-21263
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00143
Genome Viewer
NA
AA
411/137
25168-24758
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00148
Genome Viewer
NA
AA
1509/503
28533-30041
hypothetical protein
SEQF5047|JADGLP010000032.1
SEQF5047_00152
Genome Viewer
NA
AA
516/172
34084-34599
hypothetical protein
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Items 61 - 80
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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